eDNA Sampling Made Easy: The Pufferfish Family

The Aquatic Labs Pufferfish is an easy-to-use, compact, fast, and adaptive system for collecting and preserving large numbers of eDNA samples in situ.

SoloPuffer: Autonomous eDNA Sampling Wherever You Go

The SoloPuffer Sampler from Aquatic Labs is a miniaturized autonomous single-pump eDNA sampler built around the PufferFish family of pumps and modules.

SoloPuffer incorporates a hot-swappable battery, an array of optional integrated sensors to provide rich contextual data (CTD, GPS, DO, …), a wireless command and data interface, and access to the full array of PufferFish sample modules (filtration, water collection, preservation, etc) capable of collecting up to 6 independent samples and filtering a total of up to 500 liters – and fits it all into a package that is smaller than a 1.7 liter Niskin bottle (3.5” diameter and less than 24” long).

Equally suited for backpacking into remote mountain streams, diver-deploying on a coral reef, or strapping to a deep ocean lander, SoloPuffer is designed to be easily and safely deployed in the wild by non-specialist users with minimal risk of contamination.

SoloPuffer: Automated and Portable eDNA Sampler


Compact: Smaller than a 1.7L Niskin Bottle (9 cm diameter, <60 cm length)


Light: 2.5kg, 1.5kg in water


Robust: Designed to survive rough treatment, from longlines to backpacks


Battery: A hot-swappable battery pack enables autonomous deployments


Deep: Designed for deployment from mountain streams to 6000m deep


Sensitive: Rich contextual data (GPS, CTD, DO, etc) paired with each sample


**Next generation SoloPuffer under active development, specifications subject to change

MultiPuffer: High-Performance Automated eDNA Multi-Sampler

MultiPuffer packs an array of up to 16 high-performance Pufferfish pumps into a compact, robust, high-efficiency unit designed for tethered deployment on ROVs, AUVs, HOVs, docks, moorings, and other fixed infrastructure.

When large numbers of samples are needed, multiple MultiPuffer units can be daisy-chained to create large virtual units carrying hundreds of sample modules at a time, all controlled through a single cable and a unified user / vehicle interface.

The result is a system that is capable of processing far more water than a conventional Niskin carousel, fits in a fraction of the volume, enables more flexible sampling strategies, and requires far less skilled labor and time on deck or in the wet lab to collect and process samples.

MultiPuffer Features


Deep: Designed for deployments up to 6000m below the surface


Robust: Designed to survive deployment and recovery in rough seas


Easy to integrate: Seamlessly integrates onto ROV’s, AUVs, HOVs, CTD rosettes, landers, docks, moorings, or other fixed infrastructure


Programmable: Can be tethered for real-time control by a user/vehicle, or programmed for autonomous operation


Power: Requires 24V from a vehicle or battery via wet-mate connector


Pufferfish in the wild

MultiPuffer 18 Pump System deployed by National Geographic - Pristine Seas Program  in Papa New Guinea

MultiPuffer 16 Pump System deployed on the ROV Hercules by Woods Hole Oceanographic Institute